BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A04LP1|AL429662
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1473 1808 0.0
>3x_Contig1473
Length = 8041
Score = 1808 bits (912), Expect = 0.0
Identities = 918/920 (99%)
Strand = Plus / Plus
Query: 1 gatccggggaaaaaaccacagaaactggctgggcctcaggaactgactggagaaattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5640 gatccggggaaaaaaccacagaaactggctgggcctcaggaactgactggagaaattaaa 5699
Query: 61 agacatggggaaaaactaagtccagaaacaaccgcagtaaaaactgaaaaaaatctttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5700 agacatggggaaaaactaagtccagaaacaaccgcagtaaaaactgaaaaaaatctttat 5759
Query: 121 cgatctagattaagttcctttcgagatgaagtttttccaaaaggaaaaagtcataatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5760 cgatctagattaagttcctttcgagatgaagtttttccaaaaggaaaaagtcataatgtt 5819
Query: 181 tttttttttacgggggacgtttctgttgagttgaatcatgtgtactactggctctccaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5820 tttttttttacgggggacgtttctgttgagttgaatcatgtgtactactggctctccaac 5879
Query: 241 cccaaccggatagaggggagttacctatctttgcattacatgaggaataatacctggaag 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5880 cccaaccggatagaggggagtaacctatctttgcattacatgaggaataatacctggaag 5939
Query: 301 aaataggaaagaaaaaggtgagttgggttaccgatattgataattttgcgttcacaaaaa 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5940 aaataggaaagaaaaaggtgagtggggttaccgatattgataattttgcgttcacaaaaa 5999
Query: 361 gccgtgccaaatgggtacataattaaattggcacgaaaaataaattaaccgaaaaaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6000 gccgtgccaaatgggtacataattaaattggcacgaaaaataaattaaccgaaaaaaaaa 6059
Query: 421 aagaagtcaagtcgcggaggaataatgtaatttgtttcaccccggattaattttacgtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6060 aagaagtcaagtcgcggaggaataatgtaatttgtttcaccccggattaattttacgtac 6119
Query: 481 gcagaacatacagtaacacaagccaatctccacagtaaacactgcacccctcactgatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6120 gcagaacatacagtaacacaagccaatctccacagtaaacactgcacccctcactgatct 6179
Query: 541 cttcccaccaccaatgtttcatgaatacttttgctctgtagtagtaggaaaaactgatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6180 cttcccaccaccaatgtttcatgaatacttttgctctgtagtagtaggaaaaactgatga 6239
Query: 601 tagattagtttgcattcttgcgtttcattaatataatcgggaaaaacgacaggaagaacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6240 tagattagtttgcattcttgcgtttcattaatataatcgggaaaaacgacaggaagaacg 6299
Query: 661 gaaatgggcacacaaatgtctgaggagataaaaaaaattctggagatcacttgtctcact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6300 gaaatgggcacacaaatgtctgaggagataaaaaaaattctggagatcacttgtctcact 6359
Query: 721 aagtttcagctgaagtggtaatattcatcactgtactgatagtataacttggtttctcca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6360 aagtttcagctgaagtggtaatattcatcactgtactgatagtataacttggtttctcca 6419
Query: 781 gataatctcataatagattggtgtgtatatactatcggttttcgaacatcgcttccccct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6420 gataatctcataatagattggtgtgtatatactatcggttttcgaacatcgcttccccct 6479
Query: 841 tcccgaatgacgtttttccttttcaattgttttgcaagctattctctttcagacaaatgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6480 tcccgaatgacgtttttccttttcaattgttttgcaagctattctctttcagacaaatgc 6539
Query: 901 tattggtaaaaaaaaaaaaa 920
||||||||||||||||||||
Sbjct: 6540 tattggtaaaaaaaaaaaaa 6559
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 25,214
Number of Sequences: 1807
Number of extensions: 25214
Number of successful extensions: 110
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)